Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_0359Urate oxidase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. (287 aa)    
Predicted Functional Partners:
Acid_0358
KEGG: gox:GOX0903 hypothetical protein.
  
 0.998
Acid_0360
PFAM: Transthyretin; KEGG: sme:SMb20872 conserved hypothetical protein, transthyretin-like protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
 
 0.995
Acid_0356
PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: dge:Dgeo_2604 xanthine dehydrogenase.
 
 
 0.987
allB
Allantoinase; Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring; Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family.
 
 
 0.983
Acid_0355
PFAM: ferredoxin; molybdopterin dehydrogenase, FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: dge:Dgeo_2603 molybdopterin dehydrogenase, FAD-binding.
 
  
  0.964
Acid_2421
PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: aba:Acid345_0763 molybdopterin dehydrogenase, FAD-binding.
    
 0.921
Acid_3649
PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: bxe:Bxe_B2225 oxidoreductase.
    
 0.921
Acid_2419
PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: aba:Acid345_0761 2Fe-2S protein.
  
 
 0.912
Acid_2420
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: aba:Acid345_0762 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding.
    
 0.912
Acid_2917
KEGG: reu:Reut_B4505 twin-arginine translocation pathway signal.
  
 
 0.912
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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