Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_0397KEGG: ade:Adeh_0995 CoA-binding protein. (153 aa)    
Predicted Functional Partners:
Acid_1111
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: gvi:glr3733 transcription regulator Fur family homolog; Belongs to the Fur family.
  
    0.661
Acid_1857
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: deh:cbdb_A1478 transcriptional regulator, Fur family; Belongs to the Fur family.
  
    0.661
Acid_0398
PFAM: glycine cleavage H-protein; KEGG: ade:Adeh_2005 glycine cleavage H-protein.
       0.615
Acid_0399
PFAM: Polysulphide reductase, NrfD; KEGG: dde:Dde_2935 molybdopterin oxidoreductase, transmembrane subunit, putative.
       0.615
Acid_0400
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: dde:Dde_2934 molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit, putative.
       0.615
Acid_0401
Anaerobic dehydrogenases typically selenocysteine-containing-like protein; KEGG: dvu:DVU0694 molybdopterin oxidoreductase, molybdopterin-binding subunit, putative; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.615
Acid_0402
KEGG: dde:Dde_2932 hypothetical protein.
       0.615
Acid_0403
Hypothetical protein; KEGG: aba:Acid345_2945 glycine cleavage H-protein.
       0.615
Acid_0404
Hypothetical protein.
       0.615
Acid_6978
PFAM: response regulator receiver; KEGG: sru:SRU_2062 sensory box sensor histidine kianse/response regulator.
  
     0.404
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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