STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_0589KEGG: bce:BC2916 hypothetical membrane spanning protein. (317 aa)    
Predicted Functional Partners:
Acid_0590
KEGG: reu:Reut_A1747 hypothetical protein.
       0.773
Acid_0588
Sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor, interaction domain-containing protein; KEGG: pca:Pcar_2774 sigma-54 dependent transcriptional regulator.
  
    0.620
Acid_5268
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sde:Sde_3070 hypothetical protein.
  
     0.469
Acid_0587
PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: aba:Acid345_4052 AMP-dependent synthetase and ligase.
       0.441
Acid_6387
PFAM: protein of unknown function DUF1572; KEGG: aba:Acid345_4703 protein of unknown function DUF1572.
  
     0.429
Acid_2155
KEGG: bha:BH0186 hypothetical protein.
  
     0.416
Acid_4536
Ketosteroid isomerase-like protein; KEGG: mlo:mlr2180 hypothetical protein.
  
     0.413
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.