Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_0692PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: aba:Acid345_3201 ATPase associated with various cellular activities, AAA_3. (321 aa)    
Predicted Functional Partners:
Acid_2316
KEGG: aba:Acid345_0705 hypothetical protein.
  
 
 0.810
Acid_0334
PFAM: transglutaminase domain protein; KEGG: aba:Acid345_2146 transglutaminase-like.
 
  
 0.792
Acid_6434
KEGG: rba:RB8174 hypothetical protein.
 
  
 0.785
Acid_5745
KEGG: rba:RB9424 hypothetical protein.
 
  
 0.772
Acid_0691
PFAM: Protein of unknown function DUF933; KEGG: aba:Acid345_3198 protein of unknown function DUF933.
       0.741
Acid_7892
PFAM: protein of unknown function DUF58; KEGG: aba:Acid345_0630 protein of unknown function DUF58.
 
  
 0.680
Acid_0693
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: hch:HCH_01563 esterase/lipase.
       0.603
priA
Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
       0.577
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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