Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Acid_0835TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: aba:Acid345_0870 formate dehydrogenase, gamma subunit. (203 aa)    
Predicted Functional Partners:
Acid_0836
TIGRFAM: formate dehydrogenase, beta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: aba:Acid345_0869 formate dehydrogenase, beta subunit.
 
 0.998
Acid_0837
KEGG: bpm:BURPS1710b_A0730 formate dehydrogenase, alpha subunit; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.998
Acid_0838
Formate dehydrogenase; PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: bur:Bcep18194_B2101 molybdopterin oxidoreductase.
 
 0.998
Acid_3027
Formate dehydrogenase beta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: ade:Adeh_0823 4Fe-4S ferredoxin, iron-sulfur binding protein.
 
 0.994
Acid_4204
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: aba:Acid345_2601 4Fe-4S ferredoxin, iron-sulfur binding.
 
 0.992
Acid_0490
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: aba:Acid345_3003 Fe-S-cluster-containing hydrogenase.
  
 0.987
Acid_3510
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ade:Adeh_2406 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
    
 0.971
Acid_0839
Oxalate decarboxylase; PFAM: Cupin domain protein; Cupin 2, conserved barrel domain protein; KEGG: plu:plu2325 putative oxalate decarboxylase.
    
  0.964
Acid_6924
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: aba:Acid345_4238 Fe-S-cluster-containing hydrogenase.
 
 0.951
Acid_0834
Uncharacterized protein involved in formate dehydrogenase formation; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.
 
  
 0.950
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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