Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Acid_0846 | Acid_0847 | PFAM: aldo/keto reductase; KEGG: rpc:RPC_3195 aldo/keto reductase. | Hypothetical protein; KEGG: mxa:MXAN_0886 metal dependent amidohydrolase. | 0.773 |
Acid_0846 | Acid_0848 | PFAM: aldo/keto reductase; KEGG: rpc:RPC_3195 aldo/keto reductase. | PFAM: PHP C-terminal domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; Helix-hairpin-helix DNA-binding, class 1; KEGG: aba:Acid345_2389 DNA polymerase X family protein. | 0.559 |
Acid_0846 | Acid_0849 | PFAM: aldo/keto reductase; KEGG: rpc:RPC_3195 aldo/keto reductase. | PFAM: NUDIX hydrolase; KEGG: aba:Acid345_2011 NUDIX hydrolase; Belongs to the Nudix hydrolase family. | 0.560 |
Acid_0847 | Acid_0846 | Hypothetical protein; KEGG: mxa:MXAN_0886 metal dependent amidohydrolase. | PFAM: aldo/keto reductase; KEGG: rpc:RPC_3195 aldo/keto reductase. | 0.773 |
Acid_0847 | Acid_0848 | Hypothetical protein; KEGG: mxa:MXAN_0886 metal dependent amidohydrolase. | PFAM: PHP C-terminal domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; Helix-hairpin-helix DNA-binding, class 1; KEGG: aba:Acid345_2389 DNA polymerase X family protein. | 0.557 |
Acid_0847 | Acid_0849 | Hypothetical protein; KEGG: mxa:MXAN_0886 metal dependent amidohydrolase. | PFAM: NUDIX hydrolase; KEGG: aba:Acid345_2011 NUDIX hydrolase; Belongs to the Nudix hydrolase family. | 0.557 |
Acid_0848 | Acid_0846 | PFAM: PHP C-terminal domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; Helix-hairpin-helix DNA-binding, class 1; KEGG: aba:Acid345_2389 DNA polymerase X family protein. | PFAM: aldo/keto reductase; KEGG: rpc:RPC_3195 aldo/keto reductase. | 0.559 |
Acid_0848 | Acid_0847 | PFAM: PHP C-terminal domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; Helix-hairpin-helix DNA-binding, class 1; KEGG: aba:Acid345_2389 DNA polymerase X family protein. | Hypothetical protein; KEGG: mxa:MXAN_0886 metal dependent amidohydrolase. | 0.557 |
Acid_0848 | Acid_0849 | PFAM: PHP C-terminal domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; Helix-hairpin-helix DNA-binding, class 1; KEGG: aba:Acid345_2389 DNA polymerase X family protein. | PFAM: NUDIX hydrolase; KEGG: aba:Acid345_2011 NUDIX hydrolase; Belongs to the Nudix hydrolase family. | 0.807 |
Acid_0849 | Acid_0846 | PFAM: NUDIX hydrolase; KEGG: aba:Acid345_2011 NUDIX hydrolase; Belongs to the Nudix hydrolase family. | PFAM: aldo/keto reductase; KEGG: rpc:RPC_3195 aldo/keto reductase. | 0.560 |
Acid_0849 | Acid_0847 | PFAM: NUDIX hydrolase; KEGG: aba:Acid345_2011 NUDIX hydrolase; Belongs to the Nudix hydrolase family. | Hypothetical protein; KEGG: mxa:MXAN_0886 metal dependent amidohydrolase. | 0.557 |
Acid_0849 | Acid_0848 | PFAM: NUDIX hydrolase; KEGG: aba:Acid345_2011 NUDIX hydrolase; Belongs to the Nudix hydrolase family. | PFAM: PHP C-terminal domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; Helix-hairpin-helix DNA-binding, class 1; KEGG: aba:Acid345_2389 DNA polymerase X family protein. | 0.807 |