Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Acid_0510 | Acid_0888 | Acid_0510 | Acid_0888 | PFAM: Biopolymer transport protein ExbD/TolR; KEGG: aba:Acid345_0594 biopolymer transport protein ExbD/TolR. | PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: xac:XAC4174 peptidyl-prolyl cis-trans isomerase. | 0.503 |
Acid_0510 | Acid_1283 | Acid_0510 | Acid_1283 | PFAM: Biopolymer transport protein ExbD/TolR; KEGG: aba:Acid345_0594 biopolymer transport protein ExbD/TolR. | PFAM: Biopolymer transport protein ExbD/TolR; KEGG: aba:Acid345_0151 biopolymer transport protein ExbD/TolR. | 0.775 |
Acid_0887 | Acid_0888 | Acid_0887 | Acid_0888 | Hypothetical protein. | PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: xac:XAC4174 peptidyl-prolyl cis-trans isomerase. | 0.503 |
Acid_0888 | Acid_0510 | Acid_0888 | Acid_0510 | PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: xac:XAC4174 peptidyl-prolyl cis-trans isomerase. | PFAM: Biopolymer transport protein ExbD/TolR; KEGG: aba:Acid345_0594 biopolymer transport protein ExbD/TolR. | 0.503 |
Acid_0888 | Acid_0887 | Acid_0888 | Acid_0887 | PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: xac:XAC4174 peptidyl-prolyl cis-trans isomerase. | Hypothetical protein. | 0.503 |
Acid_0888 | Acid_0889 | Acid_0888 | Acid_0889 | PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: xac:XAC4174 peptidyl-prolyl cis-trans isomerase. | KEGG: ava:Ava_3619 hypothetical protein. | 0.468 |
Acid_0888 | Acid_0890 | Acid_0888 | Acid_0890 | PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: xac:XAC4174 peptidyl-prolyl cis-trans isomerase. | Hypothetical protein. | 0.458 |
Acid_0888 | Acid_0891 | Acid_0888 | Acid_0891 | PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: xac:XAC4174 peptidyl-prolyl cis-trans isomerase. | Hydrolase of the HD superfamily (permuted catalytic motifs)-like protein; KEGG: chy:CHY_2144 CRISPR-associated protein, Csm1 family. | 0.425 |
Acid_0888 | Acid_0894 | Acid_0888 | Acid_0894 | PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: xac:XAC4174 peptidyl-prolyl cis-trans isomerase. | KEGG: syn:slr1753 hypothetical protein. | 0.449 |
Acid_0888 | Acid_1283 | Acid_0888 | Acid_1283 | PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: xac:XAC4174 peptidyl-prolyl cis-trans isomerase. | PFAM: Biopolymer transport protein ExbD/TolR; KEGG: aba:Acid345_0151 biopolymer transport protein ExbD/TolR. | 0.412 |
Acid_0888 | Acid_2728 | Acid_0888 | Acid_2728 | PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: xac:XAC4174 peptidyl-prolyl cis-trans isomerase. | PFAM: Organic solvent tolerance protein; KEGG: aba:Acid345_0160 organic solvent tolerance protein OstA-like. | 0.454 |
Acid_0888 | Acid_4025 | Acid_0888 | Acid_4025 | PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: xac:XAC4174 peptidyl-prolyl cis-trans isomerase. | Hypothetical protein; KEGG: tte:TTE0643 ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, periplasmic components. | 0.437 |
Acid_0888 | tig | Acid_0888 | Acid_2025 | PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: xac:XAC4174 peptidyl-prolyl cis-trans isomerase. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.469 |
Acid_0889 | Acid_0888 | Acid_0889 | Acid_0888 | KEGG: ava:Ava_3619 hypothetical protein. | PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: xac:XAC4174 peptidyl-prolyl cis-trans isomerase. | 0.468 |
Acid_0889 | Acid_0890 | Acid_0889 | Acid_0890 | KEGG: ava:Ava_3619 hypothetical protein. | Hypothetical protein. | 0.773 |
Acid_0889 | Acid_0891 | Acid_0889 | Acid_0891 | KEGG: ava:Ava_3619 hypothetical protein. | Hydrolase of the HD superfamily (permuted catalytic motifs)-like protein; KEGG: chy:CHY_2144 CRISPR-associated protein, Csm1 family. | 0.550 |
Acid_0889 | Acid_0894 | Acid_0889 | Acid_0894 | KEGG: ava:Ava_3619 hypothetical protein. | KEGG: syn:slr1753 hypothetical protein. | 0.550 |
Acid_0890 | Acid_0888 | Acid_0890 | Acid_0888 | Hypothetical protein. | PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: xac:XAC4174 peptidyl-prolyl cis-trans isomerase. | 0.458 |
Acid_0890 | Acid_0889 | Acid_0890 | Acid_0889 | Hypothetical protein. | KEGG: ava:Ava_3619 hypothetical protein. | 0.773 |
Acid_0890 | Acid_0891 | Acid_0890 | Acid_0891 | Hypothetical protein. | Hydrolase of the HD superfamily (permuted catalytic motifs)-like protein; KEGG: chy:CHY_2144 CRISPR-associated protein, Csm1 family. | 0.550 |
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