Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Acid_0889KEGG: ava:Ava_3619 hypothetical protein. (127 aa)    
Predicted Functional Partners:
Acid_0890
Hypothetical protein.
       0.773
Acid_6716
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV3608 putative ABC transporter ATP-binding protein.
    
 0.715
Acid_5821
PFAM: permease YjgP/YjgQ family protein; KEGG: aba:Acid345_1515 transporter, YjgP/YjgQ family.
     
  0.679
Acid_6743
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_1661 ABC transporter, ATPase subunit.
     
  0.668
Acid_0582
PFAM: protein of unknown function DUF140; KEGG: aba:Acid345_2890 protein of unknown function DUF140; Belongs to the MlaE permease family.
     
  0.656
Acid_0827
PFAM: ABC-3 protein; KEGG: aae:aq_2165 putative manganese transport system permease protein.
    
 0.654
Acid_5791
KEGG: mfa:Mfla_2613 hypothetical protein.
    
 0.654
Acid_2367
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sth:STH471 spermidine/putrescine ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
     
 0.640
Acid_5434
Tungstate/molybdate transport system ATP-binding protein; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ade:Adeh_0998 molybdate ABC transporter, ATPase subunit.
     
 0.640
Acid_1203
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ava:Ava_2959 substrate-binding region of ABC-type glycine betaine transport system.
     
 0.620
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.