Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Acid_0922TIGRFAM: putative CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: aae:aq_278 hypothetical protein. (1188 aa)    
Predicted Functional Partners:
Acid_0921
KEGG: aae:aq_276 hypothetical protein.
   
 0.955
Acid_7385
KEGG: zmo:ZMO0445 hypothetical protein.
  
   
 0.585
Acid_5074
TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: rfr:Rfer_0064 ferrous iron transport protein B.
 
     0.488
Acid_0030
PFAM: UvrD/REP helicase; KEGG: sru:SRU_1806 probable ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily.
 
     0.481
Acid_0029
KEGG: ade:Adeh_2513 ATP-dependent nuclease subunit B-like.
 
     0.477
Acid_0923
Hypothetical protein; KEGG: cyb:CYB_1569 conserved repeat domain protein.
       0.429
Acid_2571
RNA-binding protein (KH domain); KEGG: dde:Dde_1098 hypothetical protein; Belongs to the UPF0109 family.
 
     0.421
Acid_3466
KEGG: cte:CT0589 hypothetical protein.
  
     0.408
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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