Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_09672-keto-3-deoxy-D-arabinonate dehydratase; PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: sso:SSO3118 hypothetical protein. (271 aa)    
Predicted Functional Partners:
Acid_0968
PFAM: aldehyde dehydrogenase; KEGG: gka:GK1411 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.977
Acid_5357
PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: bcl:ABC1110 hypothetical protein; Belongs to the IlvD/Edd family.
 
  
 0.939
Acid_0966
KEGG: rba:RB347 ferredoxin, 2Fe-2S.
       0.773
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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