Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_0974PFAM: Planctomycete cytochrome C; protein of unknown function DUF1549; KEGG: rba:RB2688 hypothetical protein-transmembrane prediction. (1017 aa)    
Predicted Functional Partners:
Acid_0975
PFAM: protein of unknown function DUF1501; KEGG: rba:RB9886 hypothetical protein, putative related to sulfatases.
 
     0.946
Acid_3506
Monoheme cytochrome SoxX (sulfur oxidation); KEGG: gme:Gmet_2122 cytochrome c, class I.
  
 
 0.926
Acid_6208
PFAM: cytochrome c, class I; Cytochrome b/b6, N-terminal domain; KEGG: gsu:GSU1649 cytochrome b/b6.
  
 
 0.918
Acid_7580
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.853
Acid_0497
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.795
Acid_6909
PFAM: cytochrome c oxidase, subunit II; cytochrome c, class I; KEGG: mlo:mll9631 cytochrome oxidase subunit II.
  
 
 0.795
Acid_6565
PFAM: NHL repeat containing protein; KEGG: bja:bll1368 hypothetical protein.
  
   0.791
Acid_0859
PFAM: protein of unknown function DUF1501; KEGG: rba:RB6556 hypothetical protein, putative related to sulfatases.
  
     0.775
Acid_1146
PFAM: protein of unknown function DUF1501; KEGG: rba:RB5328 hypothetical protein.
  
     0.775
Acid_2265
PFAM: protein of unknown function DUF1501; KEGG: rba:RB5927 hypothetical protein, putative related to sulfatases.
  
     0.775
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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