Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_10653-deoxy-D-arabinoheptulosonate-7-phosphate synthase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: aba:Acid345_3110 phospho-2-dehydro-3-deoxyheptonate aldolase. (345 aa)    
Predicted Functional Partners:
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.
 
 
 0.993
Acid_7054
PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: aba:Acid345_2043 prephenate dehydratase.
 
  
 0.925
Acid_7885
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; KEGG: tte:TTE1013 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA.
  
  
 
0.903
Acid_5467
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; PFAM: DAHP synthetase, class II; KEGG: xcb:XC_3313 family II 2-keto-3-deoxy-D-arabino-heptulosonate 7-phosphate synthase.
     
  0.900
Acid_1936
PFAM: Transketolase domain protein; Transketolase, central region; KEGG: ava:Ava_1655 transketolase.
  
 
 0.844
Acid_3864
TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region; KEGG: gvi:glr2297 transketolase; Belongs to the transketolase family.
  
 
 0.844
Acid_0656
PFAM: Transketolase domain protein; KEGG: rpc:RPC_3879 transketolase-like.
    
  0.812
Acid_0657
PFAM: Transketolase, central region; KEGG: pub:SAR11_0536 transketolase family.
    
  0.812
Acid_2452
Transketolase subunit B; PFAM: Transketolase, central region; Transketolase domain protein; KEGG: gme:Gmet_0552 transketolase-like.
    
  0.812
Acid_2453
PFAM: Transketolase domain protein; KEGG: dsy:DSY4868 hypothetical protein.
    
  0.812
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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