STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_1069PFAM: chemotaxis sensory transducer; KEGG: tdn:Tmden_0972 methyl-accepting chemotaxis sensory transducer. (533 aa)    
Predicted Functional Partners:
Acid_5070
Signal transduction histidine kinase with CheB and CheR activity; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.998
Acid_5368
PFAM: CheW domain protein; KEGG: sat:SYN_00975 chemotaxis protein.
 
 0.997
Acid_5369
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: sat:SYN_00963 chemotaxis protein.
 
 0.997
Acid_5370
PFAM: MCP methyltransferase, CheR-type; KEGG: sat:SYN_00970 chemotaxis protein methyltransferase.
 0.986
cheB
Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 0.984
cheD
CheD, stimulates methylation of MCP proteins; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
 0.980
Acid_5366
PFAM: response regulator receiver; KEGG: aba:Acid345_2920 response regulator receiver protein.
 
 
 0.823
Acid_5372
PFAM: response regulator receiver; KEGG: sat:SYN_00967 chemotaxis protein.
 
  
 0.822
Acid_6048
PFAM: response regulator receiver; KEGG: dge:Dgeo_2564 two component transcriptional regulator, winged helix family.
 
 0.780
Acid_6695
PFAM: response regulator receiver; KEGG: bth:BT2897 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system').
 
 0.780
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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