Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Acid_1080 | Acid_5931 | Acid_1080 | Acid_5931 | PFAM: major facilitator superfamily MFS_1; KEGG: aba:Acid345_1149 major facilitator superfamily (MFS) transporter. | PFAM: protein of unknown function DUF81; KEGG: aba:Acid345_1507 protein of unknown function DUF81. | 0.451 |
Acid_1080 | pckA | Acid_1080 | Acid_1079 | PFAM: major facilitator superfamily MFS_1; KEGG: aba:Acid345_1149 major facilitator superfamily (MFS) transporter. | Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. | 0.492 |
Acid_5931 | Acid_1080 | Acid_5931 | Acid_1080 | PFAM: protein of unknown function DUF81; KEGG: aba:Acid345_1507 protein of unknown function DUF81. | PFAM: major facilitator superfamily MFS_1; KEGG: aba:Acid345_1149 major facilitator superfamily (MFS) transporter. | 0.451 |
pckA | Acid_1080 | Acid_1079 | Acid_1080 | Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. | PFAM: major facilitator superfamily MFS_1; KEGG: aba:Acid345_1149 major facilitator superfamily (MFS) transporter. | 0.492 |