STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_1104PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: mtc:MT1754 3-hydroxybutyryl-CoA dehydrogenase. (309 aa)    
Predicted Functional Partners:
Acid_6224
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: aba:Acid345_1213 enoyl-CoA hydratase/isomerase.
 0.998
Acid_6581
KEGG: pfu:PF0973 acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.989
Acid_5545
3-ketoacyl-CoA thiolase; KEGG: aba:Acid345_2470 acetyl-CoA C-acyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.984
Acid_5695
3-ketoacyl-CoA thiolase; KEGG: aba:Acid345_2470 acetyl-CoA C-acyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.984
Acid_0251
KEGG: eba:ebA5729 putative 3-ketoadipyl-CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferases; beta-ketoadipyl CoA thiolase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.981
Acid_7358
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpb:RPB_2669 enoyl-CoA hydratase/isomerase.
 0.980
Acid_0255
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rso:RSp0225 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.979
Acid_5546
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: aba:Acid345_2469 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
 
0.944
Acid_5696
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: aba:Acid345_2469 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
 
0.943
Acid_7060
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: aba:Acid345_2369 acyl-CoA dehydrogenase-like.
 
 0.902
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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