STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_1169KEGG: aba:Acid345_4293 hypothetical protein. (370 aa)    
Predicted Functional Partners:
Acid_3618
PFAM: protein of unknown function DUF1328; KEGG: pae:PA5482 hypothetical protein.
  
    0.605
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
     
 0.526
Acid_1167
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
       0.469
Acid_2962
PFAM: CsbD family protein; KEGG: nmu:Nmul_A1196 CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
  
 0.446
Acid_3720
PFAM: CsbD family protein; KEGG: nmu:Nmul_A1196 CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
  
 0.446
Acid_1165
PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: aba:Acid345_3700 electron transfer flavoprotein, alpha subunit.
       0.425
Acid_1166
PFAM: electron transfer flavoprotein beta-subunit; KEGG: aba:Acid345_3697 electron transfer flavoprotein beta-subunit.
       0.425
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.