STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_1303Adenylate/guanylate cyclase; PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: sme:SMa1591 putative adenylate cyclase. (1331 aa)    
Predicted Functional Partners:
Acid_4310
PFAM: Forkhead-associated protein; cyclic nucleotide-binding; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rba:RB12994 putative oxidoreductase, Fe-S subunit.
 
 0.884
Acid_1301
Conserved hypothetical protein; KEGG: ana:alr2257 unknown protein.
 
    0.844
Acid_1302
KEGG: ava:Ava_0081 hypothetical protein.
  
    0.812
Acid_1311
Transcriptional regulator, Fis family; PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein; KEGG: mta:Moth_0909 protein serine/threonine phosphatases.
 
 
 0.802
Acid_4313
PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein; KEGG: bld:BLi01797 protein phosphatase; RBL04052.
 
 
 0.791
Acid_7519
PFAM: protein phosphatase 2C domain protein; KEGG: cya:CYA_0212 protein phosphatase 2C family protein.
 
 
 0.789
Acid_3274
PFAM: protein phosphatase 2C domain protein; KEGG: mta:Moth_0909 protein serine/threonine phosphatases.
 
 
 0.787
Acid_2119
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Two component regulator propeller; PAS fold-3 domain protein; KEGG: xcv:XCV1985 putative sensor protein.
   
 
 0.718
Acid_6027
PFAM: regulatory protein, LuxR; KEGG: rpb:RPB_2794 transcriptional regulator, LuxR family.
 
 
 
 0.641
Acid_1299
PFAM: GCN5-related N-acetyltransferase; KEGG: hch:HCH_05627 histone acetyltransferase HPA2/related acetyltransferase.
       0.622
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.