STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_1399PFAM: glycosyl transferase, family 2; KEGG: rba:RB9648 probable ceramide glucosyltransferase. (381 aa)    
Predicted Functional Partners:
Acid_1491
KEGG: aba:Acid345_0724 ceramide glucosyltransferase, putative.
  
  
 
0.927
Acid_6450
PFAM: glycosyl transferase, family 2; KEGG: aba:Acid345_0723 ceramide glucosyltransferase, putative.
  
  
 
0.926
Acid_2075
KEGG: rba:RB7871 hypothetical protein-signal peptide and transmembrane prediction.
     
 0.904
Acid_5570
PFAM: protein of unknown function DUF608; KEGG: bth:BT2908 hypothetical protein.
    
  0.903
Acid_2638
Glucosylceramidase; PFAM: glycoside hydrolase, family 30; KEGG: sde:Sde_2994 glucosylceramidase; Belongs to the glycosyl hydrolase 30 family.
     
  0.900
Acid_2894
PFAM: glycoside hydrolase, family 42, domain 5, loop region; glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; KEGG: efa:EF2709 glycosyl hydrolase, family 2.
     
 0.900
Acid_4054
PFAM: glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; KEGG: sde:Sde_1177 threonine synthase; Belongs to the glycosyl hydrolase 2 family.
     
 0.900
Acid_4607
Beta-galactosidase; PFAM: glycoside hydrolase, family 42, domain 5, loop region; glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; KEGG: aba:Acid345_4484 glycoside hydrolase family 2, TIM barrel.
     
 0.900
Acid_4901
PFAM: glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; KEGG: bfs:BF1815 beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
     
 0.900
Acid_5873
PFAM: glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; KEGG: sde:Sde_1285 beta-galactosidase/beta-glucuronidase-like; Belongs to the glycosyl hydrolase 2 family.
     
 0.900
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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