STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_1443ATP/ADP translocase-like protein; KEGG: msu:MS0135 hypothetical protein. (891 aa)    
Predicted Functional Partners:
Acid_1444
PFAM: cyclic nucleotide-binding; KEGG: sth:STH2947 putative cyclic nucleotide-binding transcriptional regulator.
       0.763
Acid_1445
Histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: gme:Gmet_3477 PAS/PAC sensor hybrid histidine kinase.
       0.741
Acid_1446
PFAM: response regulator receiver; KEGG: bur:Bcep18194_C7223 response regulator receiver (CheY-like) modulated metal-dependent phosphohydrolase.
       0.741
Acid_1441
PFAM: metallophosphoesterase; KEGG: mxa:MXAN_5467 metallophosphoesterase.
 
     0.659
Acid_6815
PFAM: aldo/keto reductase; KEGG: bpa:BPP3518 putative oxidoreductase.
 
     0.629
Acid_1442
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: gme:Gmet_3478 PAS/PAC sensor signal transduction histidine kinase.
       0.560
Acid_0010
KEGG: sde:Sde_1490 hypothetical protein.
  
     0.537
Acid_1447
Hypothetical protein.
       0.418
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.