Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Acid_1024 | Acid_1568 | KEGG: aba:Acid345_4220 hypothetical protein. | KEGG: aba:Acid345_2141 hypothetical protein. | 0.773 |
Acid_1024 | Acid_1644 | KEGG: aba:Acid345_4220 hypothetical protein. | PFAM: Cna B domain protein; KEGG: aba:Acid345_3525 Cna B-type protein. | 0.774 |
Acid_1024 | Acid_2218 | KEGG: aba:Acid345_4220 hypothetical protein. | KEGG: aba:Acid345_3561 hypothetical protein. | 0.772 |
Acid_1024 | Acid_3638 | KEGG: aba:Acid345_4220 hypothetical protein. | PFAM: Cna B domain protein; KEGG: aba:Acid345_3525 Cna B-type protein. | 0.774 |
Acid_1024 | Acid_5882 | KEGG: aba:Acid345_4220 hypothetical protein. | PFAM: Cna B domain protein; KEGG: aba:Acid345_3525 Cna B-type protein. | 0.774 |
Acid_1024 | Acid_5910 | KEGG: aba:Acid345_4220 hypothetical protein. | PFAM: von Willebrand factor, type A; KEGG: aba:Acid345_2058 von Willebrand factor, type A. | 0.769 |
Acid_1024 | Acid_7005 | KEGG: aba:Acid345_4220 hypothetical protein. | KEGG: aba:Acid345_3525 Cna B-type protein. | 0.774 |
Acid_1024 | Acid_7376 | KEGG: aba:Acid345_4220 hypothetical protein. | Hypothetical protein; KEGG: aba:Acid345_0663 TonB-dependent receptor. | 0.773 |
Acid_1567 | Acid_1568 | TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: aba:Acid345_2140 competence-damaged protein; Belongs to the CinA family. | KEGG: aba:Acid345_2141 hypothetical protein. | 0.795 |
Acid_1567 | Acid_1569 | TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: aba:Acid345_2140 competence-damaged protein; Belongs to the CinA family. | PFAM: phosphatidylglycerophosphatase A; KEGG: bth:BT1525 phosphatidylglycerophosphatase A. | 0.812 |
Acid_1568 | Acid_1024 | KEGG: aba:Acid345_2141 hypothetical protein. | KEGG: aba:Acid345_4220 hypothetical protein. | 0.773 |
Acid_1568 | Acid_1567 | KEGG: aba:Acid345_2141 hypothetical protein. | TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: aba:Acid345_2140 competence-damaged protein; Belongs to the CinA family. | 0.795 |
Acid_1568 | Acid_1569 | KEGG: aba:Acid345_2141 hypothetical protein. | PFAM: phosphatidylglycerophosphatase A; KEGG: bth:BT1525 phosphatidylglycerophosphatase A. | 0.795 |
Acid_1568 | Acid_1644 | KEGG: aba:Acid345_2141 hypothetical protein. | PFAM: Cna B domain protein; KEGG: aba:Acid345_3525 Cna B-type protein. | 0.773 |
Acid_1568 | Acid_2218 | KEGG: aba:Acid345_2141 hypothetical protein. | KEGG: aba:Acid345_3561 hypothetical protein. | 0.771 |
Acid_1568 | Acid_3638 | KEGG: aba:Acid345_2141 hypothetical protein. | PFAM: Cna B domain protein; KEGG: aba:Acid345_3525 Cna B-type protein. | 0.772 |
Acid_1568 | Acid_5882 | KEGG: aba:Acid345_2141 hypothetical protein. | PFAM: Cna B domain protein; KEGG: aba:Acid345_3525 Cna B-type protein. | 0.772 |
Acid_1568 | Acid_5910 | KEGG: aba:Acid345_2141 hypothetical protein. | PFAM: von Willebrand factor, type A; KEGG: aba:Acid345_2058 von Willebrand factor, type A. | 0.770 |
Acid_1568 | Acid_7005 | KEGG: aba:Acid345_2141 hypothetical protein. | KEGG: aba:Acid345_3525 Cna B-type protein. | 0.772 |
Acid_1568 | Acid_7376 | KEGG: aba:Acid345_2141 hypothetical protein. | Hypothetical protein; KEGG: aba:Acid345_0663 TonB-dependent receptor. | 0.770 |
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