STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_1641PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: cme:CMQ436C glycolate oxidase, peroxysomal. (392 aa)    
Predicted Functional Partners:
Acid_7243
PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; dihydroorotate dehydrogenase; KEGG: mlo:mll4732 glycolate oxidase, (S)-2-hydroxy-acid oxidase, peroxisomal.
  
  
 
0.912
Acid_1779
PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; ferredoxin-dependent glutamate synthase; KEGG: ath:At4g18360 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative.
  
  
 
0.904
Acid_4983
L-lactate transport; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
  
 0.876
Acid_1640
PFAM: peptidase M14, carboxypeptidase A; KEGG: ccr:CC0985 hypothetical protein.
  
    0.649
Acid_2058
FAD linked oxidase domain protein; PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: noc:Noc_0464 hypothetical protein.
  
 0.598
Acid_4810
PFAM: short-chain dehydrogenase/reductase SDR; MaoC domain protein dehydratase; KEGG: pfo:Pfl_0654 MaoC-like dehydratase.
  
 0.580
Acid_1642
KEGG: aba:Acid345_0663 TonB-dependent receptor.
       0.469
Acid_1660
Phosphoserine aminotransferase / L-aspartate aminotransferase; PFAM: aminotransferase, class V; KEGG: aba:Acid345_0114 aminotransferase, class V.
  
 0.459
Acid_2515
PFAM: aminotransferase, class V; KEGG: aba:Acid345_0127 alanine--glyoxylate transaminase.
  
 0.459
Acid_1643
KEGG: xcc:XCC0303 hypothetical protein.
       0.442
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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