Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_1682Superfamily I DNA and RNA helicases and helicase subunits-like protein; KEGG: deh:cbdb_A109 hypothetical protein. (1586 aa)    
Predicted Functional Partners:
Acid_1480
PFAM: Myo-inositol catabolism IolB domain protein; KEGG: gka:GK1889 myo-inositol catabolism protein.
   
    0.777
Acid_2736
Uncharacterized enzyme involved in inositol metabolism; KEGG: rha:RHA1_ro01352 myo-inositol catabolism IolB protein.
   
    0.777
Acid_1617
KEGG: ftu:FTT0522 hypothetical protein.
  
  
 0.749
Acid_0638
Hypothetical protein; KEGG: fra:Francci3_4013 transposase, IS4.
  
    0.704
Acid_0639
Conserved hypothetical protein; KEGG: ana:alr5232 unknown protein.
  
    0.704
Acid_2229
Hypothetical protein; KEGG: fra:Francci3_4013 transposase, IS4.
  
    0.704
Acid_2462
Hypothetical protein; KEGG: fra:Francci3_4013 transposase, IS4.
  
    0.704
Acid_2918
Hypothetical protein; KEGG: fra:Francci3_4013 transposase, IS4.
  
    0.704
Acid_3667
Hypothetical protein; KEGG: fra:Francci3_4013 transposase, IS4.
  
    0.704
Acid_4746
Transposase; KEGG: nha:Nham_3076 transposase.
  
    0.704
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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