STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_1925PFAM: glycoside hydrolase, family 4; KEGG: xac:XAC3081 6-phospho-beta-glucosidase. (454 aa)    
Predicted Functional Partners:
Acid_2079
PFAM: Glycosyl hydrolase family 32, N terminal domain protein; SMART: glycoside hydrolase, family 32; KEGG: bld:BLi04178 hypothetical protein.
  
  
 0.949
Acid_2768
PFAM: glycoside hydrolase, family 1; KEGG: nar:Saro_0789 glycoside hydrolase, family 1; Belongs to the glycosyl hydrolase 1 family.
 
 
 0.942
Acid_0682
Glucokinase; PFAM: ROK family protein; KEGG: aba:Acid345_0282 sugar kinase.
  
 
 0.912
Acid_0809
Glucokinase; PFAM: ROK family protein; KEGG: aba:Acid345_3865 sugar kinase.
  
 
 0.912
Acid_1070
PFAM: ROK family protein; KEGG: pai:PAE3437 glucokinase (ROK family protein), conjectural.
  
 
 0.912
Acid_2864
Glucokinase; PFAM: ROK family protein; KEGG: tma:TM1469 glucokinase.
  
 
 0.912
Acid_4416
PFAM: glycoside hydrolase, family 31; KEGG: aba:Acid345_0650 alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
  
  
 0.912
Acid_5174
PFAM: ROK family protein; KEGG: ava:Ava_4339 ROK.
  
 
 0.912
Acid_7258
PFAM: ROK family protein; KEGG: aba:Acid345_2078 sugar kinase.
  
 
 0.912
Acid_2660
PFAM: glycoside hydrolase, family 3 domain protein; PA14 domain protein; KEGG: aba:Acid345_3246 beta-glucosidase.
     
 0.903
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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