Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_1969PFAM: amidohydrolase; KEGG: aba:Acid345_1826 amidohydrolase. (406 aa)    
Predicted Functional Partners:
Acid_2282
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: ilo:IL2101 amidohydrolase family enzyme.
  
     0.766
Acid_1968
PFAM: Cna B domain protein; KEGG: aba:Acid345_0395 hypothetical protein.
       0.757
Acid_1120
PFAM: amidohydrolase; KEGG: gvi:gll3395 similar to Xaa-Pro dipeptidase.
  
     0.737
hutH
KEGG: aba:Acid345_1410 histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase.
  
  
 0.674
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
  
 0.671
Acid_6720
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: rba:RB977 probable N-acetylglucosamine-6-phosphate deacetylase.
  
     0.527
Acid_6719
PFAM: amidohydrolase; KEGG: aba:Acid345_4500 amidohydrolase.
  
     0.432
Acid_1967
KEGG: gvi:glr0823 unknown protein.
       0.415
Acid_1954
Amidohydrolase; PFAM: peptidase S9B, dipeptidylpeptidase IV domain protein; amidohydrolase; WD40 domain protein beta Propeller; KEGG: ade:Adeh_2230 hypothetical protein.
  
     0.413
Acid_4902
KEGG: sru:SRU_2428 hypothetical protein.
  
     0.402
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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