Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_1973PFAM: beta-ketoacyl synthase; acyl transferase domain protein; 4'-phosphopantetheinyl transferase; KEGG: gvi:gll4225 probable glycolipid synthase. (1646 aa)    
Predicted Functional Partners:
Acid_1972
PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; 2-nitropropane dioxygenase, NPD; KR; KEGG: fra:Francci3_0926 beta-ketoacyl synthase.
 
0.999
Acid_2598
[Acyl-carrier-protein] S-malonyltransferase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; KEGG: gsu:GSU1602 malonyl CoA-acyl carrier protein transacylase.
  
0.989
Acid_3077
PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; KR; KEGG: aba:Acid345_0465 beta-ketoacyl synthase.
 
0.976
Acid_1974
KEGG: gvi:gsl4224 probable acyl carrier protein.
  
 0.961
Acid_4714
PFAM: Thioesterase; glycosyl transferase, group 1; KEGG: ava:Ava_4730 thioesterase.
 
 0.961
Acid_1975
PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: gvi:gll4223 unknown protein.
 
     0.932
Acid_0587
PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: aba:Acid345_4052 AMP-dependent synthetase and ligase.
  
 0.916
Acid_1785
Diacylglycerol O-acyltransferase; PFAM: protein of unknown function UPF0089; KEGG: aba:Acid345_0357 protein of unknown function UPF0089.
 
 
 0.913
Acid_1327
PFAM: AMP-dependent synthetase and ligase; KEGG: sma:SAV377 putative acyl-CoA synthetase, long-chain fatty acid:CoA ligase.
 
 0.904
Acid_4812
PFAM: condensation domain protein; KEGG: pae:PA3329 hypothetical protein.
 
 
 0.903
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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