Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_1995PFAM: N-acetylmuramoyl-L-alanine amidase, family 2. (382 aa)    
Predicted Functional Partners:
Acid_1996
SMART: AAA ATPase; KEGG: aba:Acid345_0060 DNA replication protein, DnaC-like.
       0.658
Acid_1997
PFAM: glycoside hydrolase, family 35; KEGG: pho:PH0511 beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
       0.658
Acid_1993
KEGG: hma:pNG7111 hypothetical protein.
       0.559
Acid_1994
Hypothetical protein.
       0.542
Acid_1998
PFAM: aldo/keto reductase; KEGG: ava:Ava_0108 aldo/keto reductase.
       0.522
Acid_1999
KEGG: ade:Adeh_2156 hypothetical protein.
       0.522
Acid_2000
KEGG: ade:Adeh_2155 hypothetical protein.
       0.486
Acid_4586
N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; KEGG: aba:Acid345_1153 N-acetylmuramoyl-L-alanine amidase.
  
  
 0.405
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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