STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_2040Histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: dge:Dgeo_2179 multi-sensor signal transduction histidine kinase. (224 aa)    
Predicted Functional Partners:
Acid_6130
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: gvi:gll1854 two-component sensor histidine kinase.
 
 
 
 0.812
Acid_1548
PFAM: response regulator receiver; KEGG: mag:amb2979 FOG: CheY-like receiver.
  
 
   0.791
Acid_5903
PFAM: response regulator receiver; KEGG: mag:amb0918 CheY-like receiver.
  
 
   0.781
Acid_4259
Histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: bxe:Bxe_B1520 signal transduction histidine kinase (STHK) with CheB and CheR activity.
 
   
 0.776
Acid_2045
PFAM: response regulator receiver; KEGG: dra:DRA0049 response regulator.
  
    0.772
Acid_6056
Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: tel:tll1367 two-component hybrid sensor and regulator.
 
 0.770
Acid_2884
Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: tel:tll1367 two-component hybrid sensor and regulator.
 
 0.766
Acid_7553
PFAM: response regulator receiver; KEGG: dra:DRA0049 response regulator.
  
    0.763
Acid_5920
PFAM: response regulator receiver; KEGG: bca:BCE2059 DNA-binding response regulator.
 
   
 0.761
Acid_5640
PFAM: response regulator receiver; KEGG: sth:STH2398 two-component hybrid sensor and regulator.
  
    0.759
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.