Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_2103PFAM: putative esterase; glycoside hydrolase, family 13 domain protein; KEGG: aba:Acid345_3245 putative esterase. (755 aa)    
Predicted Functional Partners:
Acid_2681
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase, family 10; KEGG: sde:Sde_2633 endo-1,4-beta-xylanase.
 
   0.773
Acid_2102
KEGG: aba:Acid345_0489 alpha/beta hydrolase.
       0.746
Acid_2101
KEGG: hch:HCH_00933 TRAP-type uncharacterized transport system, periplasmic component.
       0.740
Acid_2664
PFAM: lipolytic enzyme, G-D-S-L family; KEGG: rba:RB4014 probable acetyl xylan esterase.
  
     0.696
Acid_2104
PFAM: protein of unknown function DUF303, acetylesterase putative; glycoside hydrolase family 2, sugar binding; KEGG: bth:BT4091 sialic acid-specific 9-O-acetylesterase.
 
     0.661
Acid_0259
KEGG: tfu:Tfu_2984 hypothetical protein.
 
     0.575
Acid_2993
PFAM: glycoside hydrolase, family 43; KEGG: bfs:BF0575 putative glycosyl hydrolase/xylanase.
  
     0.566
Acid_2106
PFAM: Carboxylesterase, type B; KEGG: nar:Saro_1584 carboxylesterase, type B; Belongs to the type-B carboxylesterase/lipase family.
 
     0.535
Acid_2989
PFAM: glycoside hydrolase, family 43; KEGG: sco:SCO2427 secreted arabinase; Belongs to the glycosyl hydrolase 43 family.
  
     0.494
Acid_7163
PFAM: putative esterase; KEGG: rba:RB6145 hypothetical protein.
  
     0.465
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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