Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Acid_2163PFAM: glycosyl transferase, family 2; KEGG: ret:RHE_CH00766 probable glycosyltransferase protein. (443 aa)    
Predicted Functional Partners:
Acid_0287
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: ava:Ava_3353 NAD-dependent epimerase/dehydratase.
 
    0.823
Acid_2340
PFAM: glycosyl transferase, family 2; KEGG: pst:PSPTO_1071 glycosyl transferase, group 2 family protein.
  
     0.702
Acid_3828
PFAM: glycosyl transferase, family 2; KEGG: ana:all4126 dolichol-phosphate mannosyltransferase.
  
     0.680
Acid_0280
PFAM: glycosyl transferase, family 2; KEGG: mlo:mll5672 probable sugar transferase.
  
     0.673
Acid_2236
PFAM: glycosyl transferase, family 2; KEGG: rpa:RPA4057 possible dolichol phosphate mannose synthase.
  
     0.654
Acid_4635
PFAM: glycosyl transferase, family 2; KEGG: rpd:RPD_0757 glycosyl transferase, family 2.
  
     0.646
Acid_2160
PFAM: Methyltransferase type 11; KEGG: pmi:PMT9312_0659 hypothetical protein.
  
    0.642
Acid_1035
PFAM: glycosyl transferase, family 2; KEGG: aba:Acid345_0505 glycosyl transferase, family 2.
  
     0.636
Acid_4359
PFAM: glycosyl transferase, family 2; KEGG: ade:Adeh_2624 dolichyl-phosphate beta-D-mannosyltransferase.
  
     0.513
Acid_7288
PFAM: sugar transferase; KEGG: ade:Adeh_2455 undecaprenyl-phosphate galactosephosphotransferase.
  
  
 0.445
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.