Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_2197PFAM: Ankyrin; KEGG: bur:Bcep18194_B0772 hypothetical protein. (629 aa)    
Predicted Functional Partners:
Acid_3757
PFAM: Ankyrin; KEGG: ani:AN1130.2 hypothetical protein.
  
     0.758
Acid_3655
PFAM: CBS domain containing protein; Cl- channel, voltage-gated family protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: aba:Acid345_1863 Cl-channel, voltage gated.
   
 0.741
Acid_0022
PFAM: Ankyrin; KEGG: aba:Acid345_2372 ankyrin.
  
     0.731
Acid_5825
KEGG: rba:RB601 ankyrin-related protein.
  
     0.686
Acid_0102
PFAM: Ankyrin; KEGG: mfa:Mfla_1887 ankyrin.
  
     0.649
Acid_7851
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: aba:Acid345_1052 serine/threonine protein kinase with TPR repeats.
  
 0.633
Acid_7192
PFAM: nuclear protein SET; SMART: SET-related domain protein; KEGG: cel:C26E6.9b Set (trithorax/polycomb) domain containing protein 2, isoform b.
  
 
 0.629
Acid_1210
PFAM: Ankyrin; KEGG: neu:NE1049 ankyrin-repeat.
  
     0.618
Acid_7343
Ankyrin; KEGG: dge:Dgeo_1884 ankyrin.
  
     0.613
Acid_6738
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mlr1105 hypothetical protein.
  
     0.612
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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