Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_2283PFAM: Redoxin domain protein; Thioredoxin domain; KEGG: bce:BC1473 thiol-disulfide oxidoreductase. (501 aa)    
Predicted Functional Partners:
Acid_1487
PFAM: Redoxin domain protein; KEGG: sth:STH734 cytochrome c biogenesis protein.
  
     0.761
Acid_2284
SMART: Tetratricopeptide domain protein; KEGG: gvi:gll2226 hypothetical protein.
       0.697
Acid_1475
PFAM: Redoxin domain protein; KEGG: aba:Acid345_1843 thioredoxin-like.
  
     0.587
Acid_6757
Redoxin domain protein; PFAM: cytochrome c biogenesis protein, transmembrane region; Redoxin domain protein; KEGG: bfr:BF3193 thiol:disulfide interchange protein DsbD precursor.
 
   
0.450
Acid_2282
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: ilo:IL2101 amidohydrolase family enzyme.
       0.418
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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