Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_2289Quinoprotein glucose dehydrogenase; PFAM: glucose-methanol-choline oxidoreductase; Pyrrolo-quinoline quinone; FAD dependent oxidoreductase; KEGG: pfl:PFL_5668 quinate/shikimate dehydrogenase, putative. (1128 aa)    
Predicted Functional Partners:
Acid_2288
Hypothetical protein.
       0.773
Acid_5413
PFAM: Pyrrolo-quinoline quinone; cytochrome c, class I; KEGG: bja:blr6207 probable quinoprotein ethanol dehydrogenase precursor.
 
 
0.640
Acid_6767
PFAM: Pyrrolo-quinoline quinone; cytochrome c, class I; KEGG: pfl:PFL_5668 quinate/shikimate dehydrogenase, putative.
 
 
0.615
Acid_1948
PFAM: Pyrrolo-quinoline quinone; cytochrome c, class I; KEGG: xcb:XC_2659 glucose dehydrogenase.
 
 
0.609
Acid_1932
Quinoprotein glucose dehydrogenase; PFAM: Pyrrolo-quinoline quinone; KEGG: gox:GOX1441 uncharacterized PQQ-dependent dehydrogenase 3.
 
 
0.601
Acid_7716
Gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: sme:SMa0196 putative gluconolactonase precursor.
  
 
 0.596
Acid_1149
PFAM: Pyrrolo-quinoline quinone; KEGG: aci:ACIAD2983 glucose dehydrogenase [pyrroloquinoline-quinone] precursor (quinoprotein glucose DH).
 
 
0.587
Acid_1940
PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bxe:Bxe_C0908 putative gluconolactonase.
   
 
 0.530
Acid_2801
Gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bja:bll2956 gluconolactonase.
   
 
 0.530
Acid_3430
Gluconolactonase; PFAM: putative esterase; NHL repeat containing protein; SMP-30/Gluconolaconase/LRE domain protein; KEGG: rba:RB9732 probable gluconolactonase precursor-hypothetical secreted or membrane associated protein.
   
 
 0.530
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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