STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_2290PFAM: alpha/beta hydrolase fold; KEGG: mlo:mlr2176 probable hydrolase. (310 aa)    
Predicted Functional Partners:
Acid_2291
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: gvi:gll1436 hypothetical protein.
 
     0.832
Acid_2292
PFAM: regulatory protein, ArsR; transcriptional regulator TrmB; KEGG: bha:BH0694 transcriptional regulator (ArsR family).
       0.773
Acid_5199
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ret:RHE_CH02689 putative glyoxalase protein.
  
     0.686
Acid_1972
PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; 2-nitropropane dioxygenase, NPD; KR; KEGG: fra:Francci3_0926 beta-ketoacyl synthase.
  
 
 0.620
Acid_3037
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: ade:Adeh_1211 hypothetical protein.
  
     0.546
Acid_5499
Hypothetical protein.
  
     0.515
Acid_7414
Hypothetical protein; KEGG: sma:SAV1224 hydrolase.
  
     0.504
Acid_0665
KEGG: rpc:RPC_0743 hypothetical protein.
  
   
 0.502
Acid_2120
Alpha-N-arabinofuranosidase; KEGG: afm:Afu6g14620 alpha-L-arabinofuranosidase.
  
    0.500
Acid_4028
PFAM: metallophosphoesterase; KEGG: dra:DR0935 phosphatase, putative.
  
 
  0.476
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.