Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_2292PFAM: regulatory protein, ArsR; transcriptional regulator TrmB; KEGG: bha:BH0694 transcriptional regulator (ArsR family). (119 aa)    
Predicted Functional Partners:
Acid_2291
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: gvi:gll1436 hypothetical protein.
 
  
 0.940
Acid_2290
PFAM: alpha/beta hydrolase fold; KEGG: mlo:mlr2176 probable hydrolase.
       0.773
Acid_3366
Transcriptional regulator, ArsR family; PFAM: regulatory protein, ArsR; KEGG: ret:RHE_CH03490 probable transcriptional regulator protein, ArsR family.
  
     0.772
Acid_1917
Transcriptional regulator, ArsR family; PFAM: regulatory protein, ArsR; Helix-turn-helix, type 11 domain protein; KEGG: aba:Acid345_4595 transcriptional regulator, ArsR family.
  
     0.770
Acid_5223
Transcriptional regulator, ArsR family; SMART: regulatory protein, ArsR; KEGG: ret:RHE_PE00138 putative transcriptional regulator protein, ArsR family.
  
     0.767
Acid_4019
Transcriptional regulator, ArsR family; SMART: regulatory protein, ArsR; KEGG: ret:RHE_PE00138 putative transcriptional regulator protein, ArsR family.
  
     0.766
Acid_5224
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: ret:RHE_PE00139 hypothetical protein.
 
  
 0.683
Acid_1896
PFAM: regulatory protein, ArsR; KEGG: pol:Bpro_3353 putative transcriptional regulator, ArsR family.
  
     0.661
Acid_4020
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: ret:RHE_PE00139 hypothetical protein.
 
  
 0.616
Acid_1573
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: mlo:mlr8183 hypothetical protein.
 
  
 0.553
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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