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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_2452Transketolase subunit B; PFAM: Transketolase, central region; Transketolase domain protein; KEGG: gme:Gmet_0552 transketolase-like. (326 aa)    
Predicted Functional Partners:
Acid_0656
PFAM: Transketolase domain protein; KEGG: rpc:RPC_3879 transketolase-like.
 0.999
Acid_2453
PFAM: Transketolase domain protein; KEGG: dsy:DSY4868 hypothetical protein.
 0.999
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
 
 
 0.990
Acid_3191
PFAM: ribulose-phosphate 3-epimerase; KEGG: aba:Acid345_0074 ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
 
 0.967
Acid_1936
PFAM: Transketolase domain protein; Transketolase, central region; KEGG: ava:Ava_1655 transketolase.
 
0.950
tal-2
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
 
 
 0.934
Acid_3864
TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region; KEGG: gvi:glr2297 transketolase; Belongs to the transketolase family.
  
 
0.929
Acid_0657
PFAM: Transketolase, central region; KEGG: pub:SAR11_0536 transketolase family.
  
  
 
0.928
Acid_2204
TIGRFAM: sugar-phosphate isomerases, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; KEGG: mta:Moth_2392 sugar-phosphate isomerases, RpiB/LacA/LacB family.
 
 
 0.925
Acid_7018
TIGRFAM: sugar-phosphate isomerases, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; KEGG: aba:Acid345_1263 sugar-phosphate isomerases, RpiB/LacA/LacB family.
 
 
 0.925
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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