STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_2664PFAM: lipolytic enzyme, G-D-S-L family; KEGG: rba:RB4014 probable acetyl xylan esterase. (694 aa)    
Predicted Functional Partners:
Acid_2988
PFAM: putative esterase; glycoside hydrolase, family 13 domain protein; KEGG: aba:Acid345_3245 putative esterase.
  
     0.724
Acid_2103
PFAM: putative esterase; glycoside hydrolase, family 13 domain protein; KEGG: aba:Acid345_3245 putative esterase.
  
     0.696
Acid_3215
PFAM: putative esterase; KEGG: rba:RB11670 probable ferric enterobactin esterase-related protein FeS.
  
     0.675
Acid_2991
PFAM: putative esterase; glycoside hydrolase, family 13 domain protein; KEGG: aba:Acid345_1859 putative esterase.
  
     0.646
Acid_2616
KEGG: mes:Meso_2409 hypothetical protein.
  
    0.639
Acid_3068
PFAM: putative esterase; glycoside hydrolase, family 13 domain protein; KEGG: aba:Acid345_1859 putative esterase.
  
     0.638
Acid_2073
PFAM: putative esterase; glycoside hydrolase, family 13 domain protein; KEGG: aba:Acid345_1859 putative esterase.
  
     0.637
Acid_3124
KEGG: gvi:gll3705 unknown protein.
  
     0.633
Acid_3069
PFAM: putative esterase; glycoside hydrolase, family 13 domain protein; KEGG: aba:Acid345_3245 putative esterase.
  
     0.621
Acid_7196
KEGG: gvi:glr2033 hypothetical protein.
  
     0.613
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.