STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_2851PFAM: Radical SAM domain protein; KEGG: vpa:VPA0684 putative arylsulfatase regulator. (389 aa)    
Predicted Functional Partners:
Acid_2852
Hypothetical protein.
       0.773
Acid_1528
PFAM: sulfatase; KEGG: sil:SPO3286 arylsulfatase.
 
   0.583
Acid_0879
PFAM: sulfatase; KEGG: ava:Ava_4240 twin-arginine translocation pathway signal.
 
   0.557
Acid_2871
PFAM: sulfatase; KEGG: rba:RB13148 iduronate-sulfatase or arylsulfatase A.
 
   0.556
Acid_6305
PFAM: sulfatase; KEGG: ptr:465478 steryl-sulfatase.
 
   0.532
Acid_4083
PFAM: sulfatase; KEGG: bja:bll4741 putative arylsulfatase protein.
 
   0.522
Acid_7475
PFAM: sulfatase; KEGG: bfs:BF0081 putative choline-sulfatase.
 
   0.503
Acid_3951
PFAM: sulfatase; KEGG: sco:SCO7547 sulfatase.
 
   0.500
Acid_1241
PFAM: sulfatase; KEGG: ret:RHE_CH03986 probable sulfatase (sulfuric ester hydrolase) protein.
 
   0.495
Acid_0717
PFAM: sulfatase; type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: pmu:PM1682 putative sulfatase.
 
   0.488
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.