Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Acid_2851 | Acid_2852 | Acid_2851 | Acid_2852 | PFAM: Radical SAM domain protein; KEGG: vpa:VPA0684 putative arylsulfatase regulator. | Hypothetical protein. | 0.773 |
Acid_2851 | Acid_2853 | Acid_2851 | Acid_2853 | PFAM: Radical SAM domain protein; KEGG: vpa:VPA0684 putative arylsulfatase regulator. | KEGG: aba:Acid345_3119 hypothetical protein. | 0.460 |
Acid_2851 | Acid_2854 | Acid_2851 | Acid_2854 | PFAM: Radical SAM domain protein; KEGG: vpa:VPA0684 putative arylsulfatase regulator. | Hypothetical protein. | 0.425 |
Acid_2851 | Acid_2855 | Acid_2851 | Acid_2855 | PFAM: Radical SAM domain protein; KEGG: vpa:VPA0684 putative arylsulfatase regulator. | acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.425 |
Acid_2851 | Acid_2856 | Acid_2851 | Acid_2856 | PFAM: Radical SAM domain protein; KEGG: vpa:VPA0684 putative arylsulfatase regulator. | KEGG: rme:Rmet_0657 hypothetical protein. | 0.425 |
Acid_2852 | Acid_2851 | Acid_2852 | Acid_2851 | Hypothetical protein. | PFAM: Radical SAM domain protein; KEGG: vpa:VPA0684 putative arylsulfatase regulator. | 0.773 |
Acid_2852 | Acid_2853 | Acid_2852 | Acid_2853 | Hypothetical protein. | KEGG: aba:Acid345_3119 hypothetical protein. | 0.460 |
Acid_2852 | Acid_2854 | Acid_2852 | Acid_2854 | Hypothetical protein. | Hypothetical protein. | 0.425 |
Acid_2852 | Acid_2855 | Acid_2852 | Acid_2855 | Hypothetical protein. | acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.425 |
Acid_2852 | Acid_2856 | Acid_2852 | Acid_2856 | Hypothetical protein. | KEGG: rme:Rmet_0657 hypothetical protein. | 0.425 |
Acid_2853 | Acid_2851 | Acid_2853 | Acid_2851 | KEGG: aba:Acid345_3119 hypothetical protein. | PFAM: Radical SAM domain protein; KEGG: vpa:VPA0684 putative arylsulfatase regulator. | 0.460 |
Acid_2853 | Acid_2852 | Acid_2853 | Acid_2852 | KEGG: aba:Acid345_3119 hypothetical protein. | Hypothetical protein. | 0.460 |
Acid_2853 | Acid_2854 | Acid_2853 | Acid_2854 | KEGG: aba:Acid345_3119 hypothetical protein. | Hypothetical protein. | 0.705 |
Acid_2853 | Acid_2855 | Acid_2853 | Acid_2855 | KEGG: aba:Acid345_3119 hypothetical protein. | acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.705 |
Acid_2853 | Acid_2856 | Acid_2853 | Acid_2856 | KEGG: aba:Acid345_3119 hypothetical protein. | KEGG: rme:Rmet_0657 hypothetical protein. | 0.705 |
Acid_2854 | Acid_2851 | Acid_2854 | Acid_2851 | Hypothetical protein. | PFAM: Radical SAM domain protein; KEGG: vpa:VPA0684 putative arylsulfatase regulator. | 0.425 |
Acid_2854 | Acid_2852 | Acid_2854 | Acid_2852 | Hypothetical protein. | Hypothetical protein. | 0.425 |
Acid_2854 | Acid_2853 | Acid_2854 | Acid_2853 | Hypothetical protein. | KEGG: aba:Acid345_3119 hypothetical protein. | 0.705 |
Acid_2854 | Acid_2855 | Acid_2854 | Acid_2855 | Hypothetical protein. | acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.773 |
Acid_2854 | Acid_2856 | Acid_2854 | Acid_2856 | Hypothetical protein. | KEGG: rme:Rmet_0657 hypothetical protein. | 0.773 |
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