Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_2863PFAM: aldo/keto reductase; KEGG: sme:SMc04322 putative oxidoreductase protein. (343 aa)    
Predicted Functional Partners:
Acid_2976
PFAM: aldo/keto reductase; KEGG: ade:Adeh_2076 aldo/keto reductase.
  
     0.708
Acid_7299
PFAM: aldo/keto reductase; KEGG: ade:Adeh_2076 aldo/keto reductase.
  
     0.609
Acid_7548
Oxidoreductase; KEGG: aba:Acid345_0781 oxidoreductase.
  
     0.478
Acid_6815
PFAM: aldo/keto reductase; KEGG: bpa:BPP3518 putative oxidoreductase.
 
 
0.424
Acid_2862
PFAM: protein of unknown function DUF214; KEGG: aba:Acid345_4414 ABC efflux pump, inner membrane subunit.
       0.421
Acid_0846
PFAM: aldo/keto reductase; KEGG: rpc:RPC_3195 aldo/keto reductase.
 
 
0.418
Acid_2861
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: aba:Acid345_1829 TPR repeat protein.
       0.416
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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