STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_2905Signal transduction histidine kinase, LytS; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase internal region; KEGG: sru:SRU_2326 two-component signal transduction histidine kinase. (399 aa)    
Predicted Functional Partners:
Acid_2906
PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: sru:SRU_2855 two-component system response regulator protein.
 
 
 0.960
Acid_1253
Transcriptional regulator, LytR/AlgR family; PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: aba:Acid345_1001 transcriptional regulator, LytR/AlgR family.
 
 
 0.833
Acid_1461
PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: sru:SRU_2855 two-component system response regulator protein.
 
 
 0.833
Acid_2309
PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: sru:SRU_0416 two-component system, regulatory protein.
 
 
 0.833
Acid_7003
PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: chy:CHY_0658 DNA-binding response regulator.
 
 
 0.833
Acid_2195
PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: sru:SRU_2855 two-component system response regulator protein.
 
 
 0.832
Acid_4304
PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: sru:SRU_2855 two-component system response regulator protein.
 
 
 0.832
Acid_5582
PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: aba:Acid345_3487 transcriptional regulator, LytR/AlgR family.
 
 
 0.832
Acid_1131
PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: sru:SRU_2855 two-component system response regulator protein.
 
 
 0.831
Acid_2907
PFAM: NHL repeat containing protein; KEGG: aba:Acid345_0291 cytochrome c, class I.
       0.531
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.