Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Acid_3147PFAM: TPR repeat-containing protein; peptidase domain protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: syn:slr1968 hypothetical protein. (1021 aa)    
Predicted Functional Partners:
Acid_2576
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: noc:Noc_0166 TPR repeat protein.
 
  
  0.904
Acid_1592
PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: gvi:gll1889 hypothetical protein.
 
  
  0.896
Acid_6446
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gvi:gll2226 hypothetical protein.
 
  
  0.896
Acid_0686
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: noc:Noc_0166 TPR repeat protein.
 
  
  0.890
Acid_7709
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: noc:Noc_0166 TPR repeat protein.
 
  
  0.890
Acid_5335
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cch:Cag_1169 TPR repeat.
 
  
  0.884
Acid_1946
Tetratricopeptide TPR_4; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: cch:Cag_1169 TPR repeat.
 
  
  0.850
Acid_2590
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: syn:sll0499 hypothetical protein.
 
  
 
0.826
Acid_0878
PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: gvi:gll2226 hypothetical protein.
 
  
  0.825
Acid_1652
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: syn:sll0499 hypothetical protein.
 
  
 
0.825
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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