STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_3215PFAM: putative esterase; KEGG: rba:RB11670 probable ferric enterobactin esterase-related protein FeS. (378 aa)    
Predicted Functional Partners:
efp
Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
       0.773
Acid_2664
PFAM: lipolytic enzyme, G-D-S-L family; KEGG: rba:RB4014 probable acetyl xylan esterase.
  
     0.675
Acid_0930
PFAM: protein of unknown function DUF1552; KEGG: rba:RB12022 hypothetical protein.
  
     0.655
Acid_1122
Dipeptidyl aminopeptidases/acylaminoacyl-peptidase-like protein; KEGG: eca:ECA3785 hypothetical protein.
  
     0.640
Acid_0929
PFAM: cytochrome c, class I; protein of unknown function DUF1585; Protein of unknown function DUF1587; Protein of unknown function DUF1588; Protein of unknown function DUF1592; Protein of unknown function DUF1595; KEGG: rba:RB12024 hypothetical protein-signal peptide and transmembrane prediction.
  
     0.631
Acid_7007
KEGG: mes:Meso_2409 hypothetical protein.
  
     0.622
Acid_5826
PFAM: protein of unknown function DUF1552; KEGG: rba:RB598 hypothetical protein-signal peptide prediction.
  
     0.603
Acid_1244
PFAM: protein of unknown function DUF1552; KEGG: rba:RB12022 hypothetical protein.
  
     0.602
Acid_4306
PFAM: protein of unknown function DUF1552; KEGG: rba:RB7030 hypothetical protein.
  
     0.587
Acid_6134
PFAM: cytochrome c, class I; KEGG: pfo:Pfl_1824 cytochrome c oxidase cbb3-type, subunit III.
  
     0.576
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.