Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Acid_3544KEGG: aba:Acid345_3128 hypothetical protein. (570 aa)    
Predicted Functional Partners:
Acid_3543
KEGG: aba:Acid345_3128 hypothetical protein.
 
    
0.785
Acid_3541
KEGG: aba:Acid345_3128 hypothetical protein.
 
    
0.783
Acid_3542
PFAM: t-RNA-binding domain protein; KEGG: ppr:PBPRA1633 hypothetical protein.
       0.773
Acid_3545
PFAM: amidohydrolase; D-aminoacylase domain protein; Amidohydrolase 3; KEGG: pab:PAB0090 D-aminoacylase (aspartate, glutamate etc).
       0.661
Acid_3540
Response regulator receiver protein; KEGG: aba:Acid345_0785 hypothetical protein.
       0.568
Acid_4232
PFAM: cytochrome c assembly protein; KEGG: aba:Acid345_3207 cytochrome c assembly protein.
  
 
 0.527
Acid_7417
KEGG: pfl:PFL_5489 hypothetical protein.
  
     0.487
Acid_6755
KEGG: cch:Cag_1857 hypothetical protein.
  
     0.471
Acid_4736
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gme:Gmet_0584 hypothetical protein.
  
 
  0.441
Acid_0060
KEGG: cch:Cag_1857 hypothetical protein.
 
     0.440
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.