Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_3554PFAM: PfkB domain protein; KEGG: tte:TTE0768 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase. (324 aa)    
Predicted Functional Partners:
Acid_3556
PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: tte:TTE0766 hypothetical protein.
      0.976
Acid_3555
KEGG: tte:TTE0767 hypothetical protein.
 
     0.855
Acid_7422
TIGRFAM: cytidyltransferase-related domain; PFAM: cytidylyltransferase; KEGG: cte:CT0209 cytidylyltransferase family protein.
 
     0.821
Acid_6383
TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase, family 9; KEGG: aba:Acid345_4721 glycosyl transferase, family 9.
 
   
 0.795
Acid_6381
TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase, family 9; KEGG: gsu:GSU2256 ADP-heptose--LPS heptosyltransferase II, putative.
 
   
 0.794
Acid_2356
PFAM: glycosyl transferase, family 9; KEGG: rru:Rru_A2230 glycosyl transferase, family 9.
 
   
 0.793
Acid_6553
KEGG: aae:aq_908 phosphoheptose isomerase.
 
   
 0.788
Acid_2237
KEGG: rfr:Rfer_1245 sugar isomerase (SIS).
 
   
 0.787
Acid_3557
KEGG: psp:PSPPH_4348 hypothetical protein.
       0.773
Acid_7157
D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase; TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: mag:amb0146 histidinol phosphatase and related phosphatase.
 
   
 0.756
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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