Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_3573PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: aba:Acid345_1106 hypothetical protein. (389 aa)    
Predicted Functional Partners:
Acid_1509
KEGG: aba:Acid345_3322 hypothetical protein.
  
     0.748
Acid_6775
PFAM: Cna B domain protein; KEGG: aba:Acid345_0663 TonB-dependent receptor.
  
     0.729
Acid_1568
KEGG: aba:Acid345_2141 hypothetical protein.
  
     0.728
Acid_5882
PFAM: Cna B domain protein; KEGG: aba:Acid345_3525 Cna B-type protein.
  
     0.726
Acid_1644
PFAM: Cna B domain protein; KEGG: aba:Acid345_3525 Cna B-type protein.
  
     0.717
Acid_2083
Hypothetical protein; KEGG: aba:Acid345_2388 Cna B-type protein.
  
     0.712
Acid_5431
PFAM: Cna B domain protein; KEGG: aba:Acid345_0395 hypothetical protein.
  
     0.708
Acid_7831
Hypothetical protein; KEGG: aba:Acid345_3909 TonB-dependent receptor.
  
     0.707
Acid_2665
PFAM: Cna B domain protein; TonB-dependent receptor, plug; KEGG: aba:Acid345_0918 Cna B-type protein.
  
     0.706
Acid_0035
Hypothetical protein; KEGG: aba:Acid345_0663 TonB-dependent receptor.
  
     0.703
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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