STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_3595PFAM: DinB family protein; KEGG: aba:Acid345_3332 hypothetical protein. (173 aa)    
Predicted Functional Partners:
Acid_3124
KEGG: gvi:gll3705 unknown protein.
  
     0.704
Acid_3670
KEGG: aba:Acid345_1671 hypothetical protein.
  
     0.697
Acid_3222
KEGG: aba:Acid345_1594 hypothetical protein.
  
     0.691
Acid_7648
KEGG: ape:APE0340 hypothetical protein.
  
     0.671
Acid_2616
KEGG: mes:Meso_2409 hypothetical protein.
  
     0.645
Acid_3083
KEGG: aba:Acid345_1037 hypothetical protein.
  
     0.633
Acid_3440
Hypothetical protein.
  
     0.617
Acid_4094
KEGG: cps:CPS_4697 hypothetical protein.
  
     0.605
Acid_5127
PFAM: phosphoesterase, PA-phosphatase related; KEGG: nmu:Nmul_A0927 phosphoesterase, PA-phosphatase related.
  
     0.603
Acid_7383
KEGG: sru:SRU_2528 Tat (twin-arginine translocation) pathway signal sequence domain protein.
  
     0.603
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.