Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_3602PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: aba:Acid345_3584 glyoxalase/bleomycin resistance protein/dioxygenase. (122 aa)    
Predicted Functional Partners:
Acid_6368
KEGG: bpa:BPP0665 hypothetical protein.
  
     0.536
Acid_7234
KEGG: dde:Dde_0840 hypothetical protein.
  
     0.534
Acid_1591
Hypothetical protein; KEGG: aba:Acid345_0933 Cna B-type protein.
  
     0.519
Acid_5629
KEGG: lac:LBA1470 hypothetical protein.
  
     0.519
Acid_0894
KEGG: syn:slr1753 hypothetical protein.
  
     0.507
Acid_3523
Hypothetical protein; KEGG: aba:Acid345_2388 Cna B-type protein.
  
     0.501
Acid_6485
Multidrug resistance efflux pump-like protein; KEGG: dvu:DVU2439 efflux transporter, RND family, MFP subunit.
  
     0.494
Acid_5863
PFAM: NHL repeat containing protein; KEGG: ana:alr0693 unknown protein.
  
     0.489
Acid_1744
PFAM: Cna B domain protein; KEGG: aba:Acid345_0918 Cna B-type protein.
  
     0.488
Acid_1180
Hypothetical protein; KEGG: fra:Francci3_1073 NHL repeat protein.
  
     0.484
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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