STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_3737PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; KEGG: sru:SRU_2720 probable acylaminoacyl-peptidase, putative. (976 aa)    
Predicted Functional Partners:
Acid_3734
KEGG: mth:MTH1911 hypothetical protein.
       0.773
Acid_3735
KEGG: aba:Acid345_2892 hypothetical protein.
       0.773
Acid_3736
KEGG: aba:Acid345_2892 hypothetical protein.
       0.773
Acid_0161
PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; KEGG: aba:Acid345_1151 peptidase S9, prolyl oligopeptidase active site region.
  
     0.767
Acid_6658
PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9B, dipeptidylpeptidase IV domain protein; KEGG: sru:SRU_2765 X-Pro dipeptidyl-peptidase.
  
     0.765
Acid_1826
PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9B, dipeptidylpeptidase IV domain protein; dienelactone hydrolase; KEGG: aba:Acid345_1151 peptidase S9, prolyl oligopeptidase active site region.
  
     0.763
Acid_7828
SMART: peptidase M14, carboxypeptidase A; KEGG: gvi:gll0760 hypothetical protein.
  
     0.752
Acid_1387
Peptidase S41; Degrades oligopeptides; Belongs to the peptidase S41B family.
  
     0.738
Acid_3719
Peptidase S41; Degrades oligopeptides; Belongs to the peptidase S41B family.
  
     0.723
Acid_0570
Peptidase S41; Degrades oligopeptides; Belongs to the peptidase S41B family.
  
     0.700
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.