STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_3758Conserved hypothetical protein; KEGG: gvi:gll3958 unknown protein. (208 aa)    
Predicted Functional Partners:
Acid_3759
PFAM: Endoribonuclease L-PSP; KEGG: bfs:BF0777 possible endoribonuclease.
       0.491
Acid_3760
PFAM: Ig domain protein, group 2 domain protein; protein of unknown function DUF1549; KEGG: rba:RB5921 similar to surface protein.
       0.491
Acid_3761
PFAM: protein of unknown function DUF1501; KEGG: rba:RB5927 hypothetical protein, putative related to sulfatases.
       0.491
Acid_3757
PFAM: Ankyrin; KEGG: ani:AN1130.2 hypothetical protein.
       0.447
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.