STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_4084PFAM: Acetamidase/Formamidase; KEGG: bja:blr4981 probable amidase. (331 aa)    
Predicted Functional Partners:
Acid_4085
KEGG: aba:Acid345_2892 hypothetical protein.
       0.752
Acid_7726
PFAM: MgtC/SapB transporter; KEGG: pha:PSHAa1383 transporter.
   
    0.531
Acid_4083
PFAM: sulfatase; KEGG: bja:bll4741 putative arylsulfatase protein.
       0.527
Acid_4082
KEGG: aba:Acid345_0606 hypothetical protein.
  
    0.513
Acid_4081
KEGG: aba:Acid345_4077 hypothetical protein.
       0.454
Acid_4080
KEGG: gme:Gmet_1198 hypothetical protein.
       0.451
Acid_4086
TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; KEGG: bsu:BG12951 similar to 2-oxoglutarate/malate translocator.
       0.432
Acid_4087
Hypothetical protein.
       0.432
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.